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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
88
ChIP-seq
pCHi-C
16
snATAC-seq
Assay category
100
Transcription
88
DNA binding
16
DNA accessibility
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
136
May, 2021
45
May, 2020
February, 2023
16
January, 2021
7
March, 2020
Available data
186
bam
186
bigWig
98
tsv
88
bed narrowPeak
84
tagAlign
Organism
204
Homo sapiens
Biosample type
188
primary cell
12
tissue
4
cell line
Organ
16
pancreas
8
blood
8
bodily fluid
4
epithelium
Project
4146
AMP
204
T1D
189
HPAP
47
KPMP
19
LungMap
community
1
ITG
Genome assembly (visualization)
186
GRCh38
186
hg19
Lab
196
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
pCHi-C
award.project!
community
month_released!
February, 2023
September, 2020
BIOSAMPLE
ASSAY
204 results
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total RNA-seq
ChIP-seq
snATAC-seq
primary cell
monocyte
53
84
peripheral blood mononuclear cell
8
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
tissue
islet of Langerhans
2
2
4
pancreas
4
cell line
EndoC_BH1
2
2
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