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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
total RNA-seq
86
ChIP-seq
18
snATAC-seq
pCHi-C
11
ATAC-seq
Assay category
103
Transcription
86
DNA binding
29
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
135
May, 2021
45
May, 2020
18
February, 2023
16
January, 2021
4
March, 2020
Available data
182
bam
182
bigWig
96
tsv
86
bed narrowPeak
84
tagAlign
Organism
218
Homo sapiens
Biosample type
188
primary cell
30
tissue
cell line
Organ
30
pancreas
8
blood
8
bodily fluid
Project
3607
AMP
265
HPAP
218
T1D
47
KPMP
19
LungMap
2
community
1
ITG
Genome assembly (visualization)
182
GRCh38
182
hg19
Lab
214
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
cell line
month_released!
September, 2020
BIOSAMPLE
ASSAY
218 results
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total RNA-seq
ChIP-seq
snATAC-seq
ATAC-seq
primary cell
monocyte
53
84
peripheral blood mononuclear cell
8
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
tissue
islet of Langerhans
7
2
6
11
pancreas
4
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