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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
pCHi-C
11
total RNA-seq
10
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
11
Transcription
10
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
618
February, 2021
411
August, 2017
361
May, 2021
340
May, 2020
280
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
September, 2020
49
April, 2018
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
27
November, 2018
25
February, 2020
25
March, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
3
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
13
bigWig
11
bam
10
bedpe bed3+
10
hic
10
tsv
2
bed narrowPeak
Organism
25
Homo sapiens
Biosample type
20
tissue
cell line
4
in vitro differentiated cells
1
primary cell
Organ
8
pancreas
4
heart
4
musculature of body
3
blood vessel
3
vasculature
2
liver
1
epithelium
1
vein
Project
21
AMP
4
T1D
Genome assembly (visualization)
23
hg19
11
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
cell line
month_released!
August, 2020
September, 2020
BIOSAMPLE
ASSAY
25 results
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total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
2
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
primary cell
endothelial cell of umbilical vein
1
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