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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
Assay category
3
DNA accessibility
Date released
3
February, 2023
October, 2022
Available data
1484
bam
1397
bigWig
980
fastq
833
bed narrowPeak
513
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
66
bed bed3+
11
bed bedMethyl
11
bigBed bedMethyl
9
hic
7
bed bed3
7
bed bedgraph
7
bedpe bed3+
5
hdf5
4
tar
3
txt
2
csv
1
vcf
Organism
3
Homo sapiens
Biosample type
tissue
3
in vitro differentiated cells
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
tissue
month_released!
October, 2022
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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