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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
6
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
13
DNA binding
6
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
324
November, 2017
168
February, 2021
134
May, 2022
127
August, 2017
126
May, 2021
105
February, 2023
102
May, 2020
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
23
January, 2019
21
November, 2019
12
March, 2020
12
November, 2020
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
Available data
20
bam
17
bed narrowPeak
12
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
21
Homo sapiens
Biosample type
tissue
16
cell line
5
in vitro differentiated cells
Organ
16
epithelium
16
pancreas
Project
21
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
tissue
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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