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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
39
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
June, 2019
1
July, 2019
Available data
60
bed narrowPeak
32
bam
25
bigWig
23
bigBed narrowPeak
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
71
Homo sapiens
Biosample type
71
tissue
66
cell line
2
primary cell
Organ
545
connective tissue
500
pancreas
486
adipose tissue
360
liver
283
heart
238
brain
231
kidney
158
bone element
129
blood vessel
129
vasculature
90
limb
71
artery
49
eye
49
musculature of body
43
nerve
24
spleen
19
lung
16
skeleton
15
epithelium
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
Project
71
AMP
Genome assembly (visualization)
60
GRCh38
25
hg19
Lab
71
AMP-T2D consortium
assay_title!
pCHi-C
month_released!
June, 2019
organ_slims!
intestine
BIOSAMPLE
ASSAY
71 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
1
tibial artery
1
23
2
1
pulmonary artery
2
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