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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
ChIP-seq
1
ATAC-seq
Assay category
9
DNA accessibility
6
DNA binding
Target of assay
6
control
Date released
8
January, 2021
3
January, 2019
3
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
bed narrowPeak
54
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
8
primary cell
7
cell line
Organ
729
pancreas
604
connective tissue
476
adipose tissue
373
epithelium
347
liver
199
heart
169
kidney
150
bone element
102
vasculature
100
blood vessel
81
brain
67
artery
35
musculature of body
30
limb
24
eye
23
embryo
19
lung
16
nerve
15
blood
15
bodily fluid
10
spleen
9
vein
8
skeleton
4
gonad
4
ovary
2
pericardium
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
Project
8
T1D
7
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
7
AMP-T2D consortium
assay_title!
pCHi-C
files.file_type!
bed narrowPeak
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
15 results
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snATAC-seq
ChIP-seq
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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