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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
5
total RNA-seq
1
ATAC-seq
1
RRBS
Assay category
36
DNA binding
5
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
16
broad histone mark
12
control
8
narrow histone mark
Date released
40
October, 2019
1
February, 2020
1
July, 2019
1
November, 2017
Available data
47
bam
36
bigWig
31
bed narrowPeak
30
bigBed narrowPeak
6
bed broadPeak
bigBed broadPeak
5
tsv
4
bed bed3+
3
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
43
Homo sapiens
Biosample type
41
tissue
2
primary cell
Organ
938
pancreas
725
liver
670
connective tissue
502
epithelium
487
adipose tissue
360
heart
274
kidney
246
brain
218
vasculature
blood vessel
158
bone element
137
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
53
eye
41
nerve
37
embryo
23
spleen
19
lung
18
vein
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
43
AMP
Genome assembly (visualization)
31
hg19
29
GRCh38
Lab
43
AMP-T2D consortium
assay_title!
pCHi-C
files.file_type!
bigBed broadPeak
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
ATAC-seq
RRBS
tissue
tibial nerve
35
5
1
primary cell
choroid plexus epithelial cell
1
1
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