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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
12
ATAC-seq
7
total RNA-seq
4
Hi-C
Assay category
18
DNA binding
12
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
17
October, 2019
8
February, 2021
8
February, 2023
4
July, 2019
3
February, 2020
1
May, 2019
Available data
116
bam
94
bed narrowPeak
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
4
bed bed3
4
txt
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
41
tissue
Organ
322
pancreas
223
epithelium
221
kidney
166
heart
166
liver
109
connective tissue
100
bone element
80
vasculature
79
blood vessel
64
adipose tissue
62
brain
56
artery
51
eye
31
limb
27
musculature of body
19
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
8
embryo
8
spleen
7
vein
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
41
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
41
AMP-T2D consortium
assay_title!
pCHi-C
files.file_type!
bigWig
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
1
4
acetabular part of hip bone
1
1
ilium
1
1
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