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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
2
DNase-seq
2
Hi-C
pCHi-C
Assay category
21
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
19
histone
19
histone modification
10
narrow histone mark
9
broad histone mark
2
control
Date released
24
October, 2019
1
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
tar
Organism
25
Homo sapiens
Biosample type
21
primary cell
4
tissue
Organ
945
pancreas
785
liver
679
connective tissue
523
epithelium
489
adipose tissue
390
heart
352
kidney
284
brain
234
vasculature
228
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
69
blood
69
bodily fluid
57
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
25
AMP
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
pCHi-C
files.file_type!
tar
month_released!
March, 2023
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
2
tissue
islet of Langerhans
4
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