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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
pCHi-C
Assay category
14
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
8
control
histone
7
histone modification
6
transcription factor
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
1
January, 2019
1
October, 2017
1
October, 2019
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
794
pancreas
685
liver
601
connective tissue
457
adipose tissue
431
epithelium
322
kidney
293
heart
164
vasculature
159
blood vessel
158
bone element
121
artery
97
brain
73
limb
68
blood
68
bodily fluid
62
musculature of body
54
eye
25
embryo
19
lung
19
nerve
18
spleen
18
ureter
16
skeleton
7
vein
2
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
19
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
19
AMP-T2D consortium
assay_title!
pCHi-C
files.file_type!
vcf
target.investigated_as!
histone
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
tissue
spleen
14
1
2
1
islet of Langerhans
1
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