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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
89
histone
89
histone modification
64
transcription factor
48
broad histone mark
41
narrow histone mark
11
RNA binding protein
9
control
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
47
November, 2017
17
August, 2017
Available data
479
bigWig
468
bam
464
bed narrowPeak
437
fastq
400
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
15
bed bed3+
9
tagAlign
3
tar
Organism
64
Homo sapiens
Biosample type
44
cell line
9
tissue
6
in vitro differentiated cells
5
primary cell
Organ
46
liver
10
connective tissue
7
pancreas
adipose tissue
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
64
AMP
Genome assembly (visualization)
64
hg19
51
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
pCHi-C
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
cell line
HepG2
44
tissue
islet of Langerhans
7
liver
2
in vitro differentiated cells
adipocyte
6
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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