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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
1
RRBS
1
WGBS
pCHi-C
Assay category
67
Transcription
2
DNA methylation
Date released
52
February, 2021
7
July, 2019
6
August, 2021
3
February, 2020
1
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
67
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
69
Homo sapiens
Biosample type
52
cell line
14
tissue
3
primary cell
Organ
479
connective tissue
422
pancreas
402
adipose tissue
175
liver
173
heart
162
epithelium
69
vasculature
68
blood vessel
58
artery
58
bone element
26
brain
26
kidney
14
embryo
12
musculature of body
8
limb
6
eye
5
nerve
2
pericardium
2
spleen
1
spinal cord
Project
69
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
69
AMP-T2D consortium
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
single cell RNA-seq
RRBS
WGBS
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
choroid plexus epithelial cell
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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