Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
19
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
54
Transcription
19
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
17
October, 2019
3
July, 2019
2
June, 2019
1
May, 2019
Available data
96
bam
79
bigWig
68
bed narrowPeak
58
tsv
19
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
79
Homo sapiens
Biosample type
56
cell line
21
tissue
2
primary cell
Organ
570
liver
554
pancreas
552
connective tissue
423
adipose tissue
253
epithelium
184
heart
130
vasculature
126
blood vessel
116
brain
116
kidney
79
artery
77
limb
58
bone element
57
musculature of body
54
blood
54
bodily fluid
23
nerve
22
embryo
18
ureter
14
spleen
10
vein
5
eye
1
pericardium
Project
79
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
79
AMP-T2D consortium
assay_title!
pCHi-C
target.investigated_as!
narrow histone mark
nucleotide modification
BIOSAMPLE
ASSAY
79 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
14
2
1
coronary artery
1
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download