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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
11
ATAC-seq
6
WGBS
Assay category
53
Transcription
11
DNA accessibility
6
DNA methylation
Date released
37
February, 2023
19
September, 2020
7
August, 2020
6
February, 2021
1
October, 2017
Available data
bam
623
bigWig
471
fastq
416
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
hdf5
Organism
70
Homo sapiens
Biosample type
69
primary cell
1
tissue
Organ
70
pancreas
69
epithelium
4
liver
2
musculature of body
1
adipose tissue
1
brain
1
connective tissue
1
embryo
Project
69
HPAP
1
AMP
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
69
Klaus Kaestner, Upenn
1
Stephen Parker, UMich
assay_title!
pCHi-C
files.file_type!
bam
hdf5
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell
42
7
6
pancreatic beta cell
11
3
tissue
islet of Langerhans
1
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