Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
7
total RNA-seq
2
ATAC-seq
Assay category
66
DNA binding
38
DNA accessibility
7
Transcription
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
69
October, 2019
32
June, 2019
7
May, 2019
July, 2019
3
February, 2020
Available data
107
bam
90
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
111
Homo sapiens
Biosample type
111
tissue
Organ
938
pancreas
778
liver
661
connective tissue
511
epithelium
477
adipose tissue
365
heart
341
kidney
266
brain
223
vasculature
218
blood vessel
158
bone element
138
artery
117
limb
85
musculature of body
69
blood
69
bodily fluid
56
eye
43
nerve
37
embryo
24
spleen
22
vein
19
lung
18
ureter
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
111
AMP
Genome assembly (visualization)
90
hg19
89
GRCh38
Lab
111
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
month_released!
August, 2022
July, 2019
organ_slims!
skeleton
BIOSAMPLE
ASSAY
111 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
35
2
5
1
tibial artery
23
2
1
1
muscle of leg
7
13
muscle of arm
17
forelimb muscle
1
+ See 3 more…
See all biosamples
Download