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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
DNase-seq
pCHi-C
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
940
pancreas
788
liver
678
connective tissue
524
epithelium
488
adipose tissue
heart
352
kidney
268
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
69
blood
bodily fluid
57
eye
43
nerve
37
embryo
23
spleen
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
23
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
23
AMP-T2D consortium
assay_title!
pCHi-C
month_released!
October, 2017
organ_slims!
bodily fluid
heart
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
WGBS
DNase-seq
tissue
spleen
20
2
1
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