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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
pCHi-C
Assay category
59
Transcription
3
DNA accessibility
Date released
711
February, 2021
382
May, 2021
357
August, 2017
303
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
30
March, 2020
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
44
fastq
19
zippedFastqFolder
6
bigWig
3
bam
3
tsv
Organism
62
Homo sapiens
Biosample type
62
primary cell
Organ
22
epithelium
22
pancreas
Project
59
HPAP
3
AMP
Genome assembly (visualization)
6
GRCh38
3
hg19
Lab
59
Klaus Kaestner, Upenn
3
AMP-T2D consortium
assay_title!
pCHi-C
organ_slims!
liver
BIOSAMPLE
ASSAY
62 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
2
15
2
pancreatic beta cell
1
1
pancreatic acinar cell
1
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