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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
total RNA-seq
10
MeRIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
28
Transcription
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
711
February, 2021
382
May, 2021
357
August, 2017
303
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
30
March, 2020
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
28
tsv
6
bam
5
bigWig
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
28
tissue
6
cell line
6
primary cell
Organ
12
brain
11
pancreas
8
connective tissue
6
epithelium
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
musculature of body
1
eye
liver
1
nerve
1
spinal cord
Project
40
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
30
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
7
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
liver
BIOSAMPLE
ASSAY
40 results
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Clear Filters
total RNA-seq
MeRIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
4
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 20 more…
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
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