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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
13
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
15
bam
12
bed narrowPeak
12
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
16
Homo sapiens
Biosample type
16
cell line
Organ
55
pancreas
16
epithelium
1
adipose tissue
1
connective tissue
Project
16
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
ovary
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
1
1
1
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