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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 45ATAC-seq
  • 34ChIP-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 49DNA accessibility
  • 34DNA binding
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • 5transcription factor
  • 1RNA binding protein
Date released
  • 66February, 2021
  • 35February, 2023
  • 26October, 2019
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 102bam
  • 85bigWig
  • 74bed narrowPeak
  • 58tsv
  • 25bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 141Homo sapiens
Biosample type
  • 73tissue
  • 66cell line
  • 2primary cell
Organ
  • 945pancreas
  • 788liver
  • 679connective tissue
  • 524epithelium
  • 489adipose tissue
  • 390heart
  • 352kidney
  • 284brain
  • 235vasculature
  • 229blood vessel
  • 158bone element
  • 141artery
  • 122limb
  • 95musculature of body
  • 69blood
  • 69bodily fluid
  • 57eye
  • 43nerve
  • 37embryo
  • 24spleen
  • 22vein
  • 19lung
  • 18ureter
  • 16skeleton
  • 4gonad
  • 4ovary
  • 2pericardium
  • 2pituitary gland
  • 1lymph node
  • 1skin of body
  • 1spinal cord
Project
  • 141AMP
Genome assembly (visualization)
  • 128GRCh38
  • 93hg19
Lab
  • 141AMP-T2D consortium
assay_title!
  • pCHi-C
BIOSAMPLE
ASSAY

141 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery13652
tibial artery11232
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5286
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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