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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
8
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
narrow histone mark
Date released
8
January, 2021
3
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
8
bam
8
fastq
3
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
9
cell line
8
primary cell
Organ
848
pancreas
606
connective tissue
463
epithelium
460
adipose tissue
390
liver
333
heart
327
kidney
200
vasculature
196
blood vessel
164
brain
158
bone element
130
artery
107
limb
82
musculature of body
53
eye
35
nerve
26
embryo
19
lung
18
ureter
17
blood
17
bodily fluid
16
skeleton
16
spleen
16
vein
2
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
9
AMP
8
T1D
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
9
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_title!
pCHi-C
target.investigated_as!
narrow histone mark
nucleotide modification
transcription factor
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
8
1
primary cell
peripheral blood mononuclear cell
8
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