Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
1017
histone modification
1016
histone
514
narrow histone mark
514
transcription factor
501
broad histone mark
343
control
RNA binding protein
89
recombinant protein
36
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
11
November, 2017
8
November, 2018
2
August, 2017
2
December, 2017
2
December, 2018
2
January, 2019
Available data
27
bam
27
bed narrowPeak
27
bigWig
27
fastq
25
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
20
cell line
5
tissue
2
in vitro differentiated cells
Organ
17
liver
5
blood
5
bodily fluid
3
spleen
2
connective tissue
Project
27
AMP
Genome assembly (visualization)
27
hg19
26
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
8
inconsistent control read length
5
inconsistent control run_type
assay_title!
pCHi-C
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
15
GM12878
5
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
Download