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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
4
February, 2021
2
February, 2023
Available data
417
bam
405
fastq
232
bigWig
184
bed narrowPeak
184
tsv
153
zippedFastqFolder
152
tagAlign
76
txt
44
bigBed narrowPeak
40
bed broadPeak
18
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
17
hic
16
bedpe bed3+
13
bed bed3+
10
bed bed3
8
csv
6
bed bedgraph
4
hdf5
4
tar
3
cool
1
bedpe
1
vcf
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Organ
4
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
assay_title!
shRNA RNA-seq
assembly!
GRCh38
audit.ERROR.category!
inconsistent ontology term
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
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