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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
ATAC-seq
2
DNase-seq
Assay category
6
DNA binding
4
DNA accessibility
Target of assay
5
RNA binding protein
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
5
October, 2018
2
August, 2017
1
June, 2019
1
November, 2018
1
October, 2019
Available data
440
bam
423
bigWig
400
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
10
Homo sapiens
Biosample type
10
tissue
Organ
356
liver
116
brain
88
heart
88
kidney
84
limb
69
pancreas
62
blood vessel
62
vasculature
54
blood
54
bodily fluid
38
musculature of body
26
nerve
25
artery
18
ureter
15
epithelium
13
connective tissue
13
spleen
10
adipose tissue
3
eye
0
gonad
Project
10
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
10
AMP-T2D consortium
assay_title!
shRNA RNA-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
omental fat pad
3
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
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