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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
26
ChIP-seq
24
total RNA-seq
5
DNase-seq
4
pCHi-C
Assay category
34
DNA accessibility
26
DNA binding
24
Transcription
Target of assay
26
histone
26
histone modification
16
broad histone mark
control
10
narrow histone mark
Date released
52
October, 2019
31
February, 2023
3
June, 2019
2
February, 2020
Available data
57
bed narrowPeak
34
bam
34
bigWig
29
bigBed narrowPeak
10
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
Organism
88
Homo sapiens
Biosample type
88
tissue
4
primary cell
Organ
523
connective tissue
476
pancreas
464
adipose tissue
315
liver
297
heart
293
kidney
240
brain
158
bone element
117
blood vessel
117
vasculature
105
limb
78
musculature of body
66
artery
56
eye
32
nerve
20
lung
18
ureter
17
spleen
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
88
AMP
Genome assembly (visualization)
61
hg19
34
GRCh38
Lab
88
AMP-T2D consortium
assay_title!
shRNA RNA-seq
target.investigated_as!
control
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
tibial nerve
1
24
5
2
islet of Langerhans
1
2
14
4
retina
15
3
3
pigmented layer of retina
12
2
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