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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
Assay category
12
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
4
histone
4
histone modification
4
narrow histone mark
Date released
5
November, 2018
4
December, 2018
4
October, 2019
2
March, 2020
1
January, 2019
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
250
kidney
159
bone element
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
17
AMP-T2D consortium
assay_title!
shRNA RNA-seq
files.file_type!
bigBed narrowPeak
organ_slims!
brain
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
ATAC-seq
tissue
spleen
8
2
1
1
islet of Langerhans
4
ovary
1
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