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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
913
pancreas
702
liver
660
connective tissue
511
epithelium
482
adipose tissue
380
heart
288
kidney
226
vasculature
220
blood vessel
166
brain
159
bone element
135
artery
122
limb
76
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
1
bone marrow
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
assay_title!
shRNA RNA-seq
files.file_type!
tagAlign
xls
month_released!
March, 2020
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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