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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
129
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
124
histone
124
histone modification
75
broad histone mark
49
narrow histone mark
control
5
RNA binding protein
5
transcription factor
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
September, 2017
4
August, 2018
4
March, 2023
4
October, 2022
3
June, 2018
1
August, 2022
Available data
169
bam
169
bigWig
143
bed narrowPeak
111
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
170
Homo sapiens
Biosample type
93
tissue
77
primary cell
Organ
73
pancreas
65
epithelium
39
blood vessel
39
vasculature
25
brain
15
heart
6
limb
6
musculature of body
4
kidney
3
artery
Project
170
AMP
Genome assembly (visualization)
169
hg19
168
GRCh38
Lab
170
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_title!
shRNA RNA-seq
month_released!
February, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
170 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 6 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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