Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
286
ChIP-seq
Assay category
286
DNA binding
Target of assay
619
histone
619
histone modification
459
transcription factor
333
narrow histone mark
286
broad histone mark
271
control
98
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
August, 2017
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
15
December, 2017
10
May, 2021
10
October, 2017
8
August, 2021
8
February, 2018
6
November, 2019
4
January, 2019
Available data
264
bed narrowPeak
264
bigWig
245
bam
209
bigBed narrowPeak
57
tagAlign
52
fastq
12
bed broadPeak
8
bigBed broadPeak
5
bed bed3+
Organism
286
Homo sapiens
Biosample type
230
tissue
primary cell
36
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
57
heart
36
blood vessel
36
vasculature
34
limb
29
pancreas
22
liver
16
nerve
14
artery
13
epithelium
10
kidney
4
embryo
4
musculature of body
4
spleen
Project
286
AMP
Genome assembly (visualization)
263
GRCh38
208
hg19
Lab
255
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
10
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
12
inconsistent control read length
assay_title!
siRNA RNA-seq
biosample_type!
primary cell
month_released!
August, 2017
August, 2022
BIOSAMPLE
ASSAY
286 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
brain
13
+ See 22 more…
in vitro differentiated cells
embryonic stem cell
11
hepatocyte
7
neural progenitor cell
7
pancreatic endoderm
4
definitive endodermal cell
2
+ See 4 more…
cell line
HepG2
9
EndoC_BH1
6
Panc1
4
stem cell
hESC
1
See all biosamples
Download