Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
29
ATAC-seq
17
pCHi-C
7
total RNA-seq
1
DNAme array
Assay category
37
DNA binding
29
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
RNA binding protein
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
91
May, 2021
81
May, 2020
70
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
May, 2023
14
April, 2019
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
bigWig
277
bam
173
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
91
Homo sapiens
Biosample type
38
in vitro differentiated cells
35
primary cell
16
cell line
2
tissue
Organ
18
pancreas
17
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
74
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
55
Kyle Gaulton, UCSD
36
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_title!
siRNA RNA-seq
files.file_type!
bigWig
month_released!
May, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
32
5
pancreatic PP cell
1
primary cell
monocyte
1
13
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
+ See 10 more…
cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
See all biosamples
Download