Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
single cell RNA-seq
2
FAIRE-seq
Assay category
44
Transcription
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
697
February, 2021
399
May, 2021
396
November, 2017
372
August, 2017
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
93
December, 2017
87
July, 2019
84
November, 2018
80
April, 2019
76
October, 2018
64
March, 2020
61
November, 2019
40
May, 2024
40
September, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
64
bigWig
61
bam
44
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
87
Homo sapiens
Biosample type
61
tissue
26
primary cell
Organ
24
heart
15
connective tissue
13
epithelium
12
vasculature
11
blood vessel
11
brain
10
kidney
9
adipose tissue
8
musculature of body
7
liver
5
limb
4
pancreas
3
artery
2
pericardium
1
eye
Project
87
AMP
Genome assembly (visualization)
70
hg19
58
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
single cell RNA-seq
small RNA-seq
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
+ See 25 more…
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 18 more…
See all biosamples
Download