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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
snATAC-seq
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
6
DNA methylation
4
DNA accessibility
3
DNA binding
Target of assay
3
control
Date released
167
February, 2023
162
August, 2017
144
May, 2022
134
May, 2020
124
November, 2017
123
May, 2021
107
October, 2019
102
August, 2021
102
February, 2021
48
March, 2020
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
17
December, 2017
16
April, 2019
16
September, 2020
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
8
November, 2018
5
December, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
2
December, 2019
1
August, 2018
Available data
84
txt
9
tsv
6
fastq
4
bam
4
bed bedgraph
3
tagAlign
2
bed bed3+
Organism
102
Homo sapiens
Biosample type
87
tissue
7
primary cell
4
cell line
4
in vitro differentiated cells
Organ
84
bone element
6
epithelium
6
pancreas
5
connective tissue
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
96
AMP
6
HPAP
Genome assembly (visualization)
574
hg19
GRCh38
Lab
96
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
assay_title!
single cell RNA-seq
snATAC-seq
assembly!
GRCh38
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
102 results
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Clear Filters
RNA microarray
WGBS
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
pancreatic alpha cell
6
osteoblast
1
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
in vitro differentiated cells
adipocyte
4
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