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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
48
snATAC-seq
47
WGBS
39
ATAC-seq
3
Hi-C
Assay category
92
Transcription
87
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
76
February, 2023
33
February, 2021
16
September, 2020
3
October, 2022
Available data
125
fastq
101
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
229
Homo sapiens
Biosample type
229
primary cell
Organ
142
epithelium
142
pancreas
Project
1185
AMP
229
HPAP
58
T1D
10
LungMap
4
community
Genome assembly (visualization)
GRCh38
3
hg19
Lab
229
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
single cell RNA-seq
assembly!
GRCh38
month_released!
April, 2018
organ_slims!
eye
BIOSAMPLE
ASSAY
229 results
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total RNA-seq
snATAC-seq
WGBS
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
31
22
1
Langerhans cell
48
pancreatic beta cell
11
16
13
1
exocrine cell
39
pancreatic acinar cell
4
1
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