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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
9
ChIP-seq
6
MeRIP-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
16
DNA accessibility
9
DNA binding
Target of assay
11
control
3
nucleotide modification
1
broad histone mark
1
histone
1
histone modification
Date released
16
May, 2021
7
October, 2019
6
November, 2020
2
August, 2021
2
November, 2019
1
February, 2023
Available data
9
bam
Organism
33
Homo sapiens
Biosample type
161
primary cell
92
tissue
34
cell line
1
in vitro differentiated cells
Organ
71
liver
34
pancreas
27
epithelium
7
kidney
6
blood
6
bodily fluid
2
artery
2
blood vessel
2
heart
2
vasculature
1
mammary gland
Project
34
AMP
Genome assembly (visualization)
hg19
55
GRCh38
Lab
28
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
26
inconsistent ontology term
assay_title!
single cell RNA-seq
assembly!
hg19
organ_slims!
bone element
BIOSAMPLE
ASSAY
34 results
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ATAC-seq
ChIP-seq
MeRIP-seq
Capture-C
CRISPR genome editing followed by sgRNA sequencing
cell line
EndoC_BH1
16
2
6
2
1
Panc1
7
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