Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
58
ChIP-seq
35
ATAC-seq
8
WGBS
3
pCHi-C
3
total RNA-seq
Assay category
58
DNA binding
35
DNA accessibility
8
DNA methylation
3
Transcription
Target of assay
35
histone
35
histone modification
20
broad histone mark
18
control
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
40
May, 2024
35
February, 2023
10
April, 2019
8
July, 2019
6
May, 2019
June, 2019
3
February, 2020
3
March, 2020
2
February, 2021
Available data
75
bed narrowPeak
46
bigWig
24
bam
6
bed bedMethyl
6
bigBed bedMethyl
6
tsv
2
tagAlign
Organism
107
Homo sapiens
Biosample type
105
tissue
2
cell line
Organ
286
pancreas
205
epithelium
165
liver
153
kidney
112
brain
107
heart
91
connective tissue
89
bone element
65
adipose tissue
64
blood vessel
64
vasculature
46
artery
26
eye
26
limb
20
musculature of body
14
blood
14
bodily fluid
12
nerve
11
lung
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
107
AMP
Genome assembly (visualization)
233
GRCh38
hg19
Lab
67
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
assay_title!
single cell RNA-seq
assembly!
hg19
month_released!
June, 2019
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
107 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
WGBS
pCHi-C
total RNA-seq
tissue
left cardiac atrium
40
coronary artery
2
35
1
heart left ventricle
6
4
1
heart right ventricle
2
2
1
right atrium auricular region
3
1
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
2
See all biosamples
Download