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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
2
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
8
Transcription
2
DNA accessibility
1
3D chromatin structure
Date released
159
February, 2023
153
August, 2021
135
August, 2017
127
May, 2022
125
November, 2017
123
February, 2021
97
October, 2019
83
May, 2021
81
May, 2020
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
September, 2020
17
December, 2017
17
July, 2019
16
January, 2021
16
November, 2018
15
April, 2019
11
May, 2023
10
April, 2020
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
December, 2019
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
7
Homo sapiens
Biosample type
6
tissue
2
cell line
2
stem cell
1
primary cell
Organ
6
pancreas
Project
6
AMP
4
community
1
ITG
Genome assembly (visualization)
119
GRCh38
hg19
Lab
4
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
assay_title!
single cell RNA-seq
assembly!
hg19
BIOSAMPLE
ASSAY
11 results
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Clear Filters
total RNA-seq
ATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
islet of Langerhans
4
2
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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