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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
single cell RNA-seq
2
WGBS
2
pCHi-C
2
total RNA-seq
1
DNase-seq
Assay category
19
DNA binding
2
DNA methylation
2
Transcription
1
DNA accessibility
Target of assay
16
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
10
October, 2019
9
May, 2019
2
February, 2020
2
July, 2019
2
March, 2020
1
June, 2019
Available data
22
bam
4
tsv
2
bigWig
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
26
Homo sapiens
Biosample type
19
tissue
6
primary cell
1
cell line
Organ
288
pancreas
213
epithelium
165
liver
161
kidney
122
brain
heart
95
connective tissue
89
bone element
65
adipose tissue
65
blood vessel
65
vasculature
46
artery
27
eye
26
limb
22
musculature of body
14
blood
14
bodily fluid
12
nerve
11
lung
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
hg19
80
GRCh38
Lab
26
AMP-T2D consortium
assay_title!
single cell RNA-seq
assembly!
hg19
organ_slims!
heart
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
WGBS
pCHi-C
total RNA-seq
DNase-seq
tissue
tibial artery
5
1
aorta
2
2
1
ascending aorta
3
1
thoracic aorta
4
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
cell line
MCF-7
1
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