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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
Assay category
8
DNA accessibility
Date released
6
February, 2023
2
February, 2021
Available data
2100
bam
2071
bigWig
1238
tsv
828
bed narrowPeak
683
fastq
624
bigBed narrowPeak
233
bed broadPeak
232
bigBed broadPeak
225
bed bed3+
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
11
tagAlign
8
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
1
primary cell
1
tissue
Organ
6
connective tissue
bone element
4
skeleton
1
brain
1
liver
Project
8
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
single cell RNA-seq
organ_slims!
bone element
target.investigated_as!
histone
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
tissue
brain
1
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