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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
49
ATAC-seq
47
WGBS
21
snATAC-seq
Assay category
92
Transcription
70
DNA accessibility
47
DNA methylation
Date released
101
May, 2022
76
February, 2023
19
September, 2020
7
August, 2020
6
February, 2021
Available data
108
fastq
101
zippedFastqFolder
10
bigWig
6
tsv
Organism
209
Homo sapiens
Biosample type
209
primary cell
Organ
149
epithelium
149
pancreas
Project
209
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3614
AMP-T2D consortium
343
Kyle Gaulton, UCSD
209
Klaus Kaestner, Upenn
131
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
audit script error
assay_title!
single cell RNA-seq
audit.ERROR.category!
audit script error
month_released!
October, 2018
BIOSAMPLE
ASSAY
209 results
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total RNA-seq
ATAC-seq
WGBS
snATAC-seq
primary cell
pancreatic alpha cell
42
29
31
pancreatic beta cell
11
16
16
exocrine cell
39
Langerhans cell
21
pancreatic acinar cell
4
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