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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
31
total RNA-seq
14
ATAC-seq
single cell RNA-seq
Assay category
57
DNA binding
31
Transcription
14
DNA accessibility
Target of assay
39
histone
39
histone modification
21
broad histone mark
18
narrow histone mark
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
control
Date released
670
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
311
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
165
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
1
August, 2018
1
October, 2022
Available data
102
bam
102
fastq
98
bigWig
67
bed narrowPeak
35
bigBed narrowPeak
31
tsv
Organism
102
Homo sapiens
Biosample type
72
primary cell
23
cell line
7
tissue
Organ
72
pancreas
61
epithelium
18
blood
18
bodily fluid
7
spleen
5
liver
Project
102
AMP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
102
AMP-T2D consortium
Audit category:
32
missing controlled_by
assay_title!
single cell RNA-seq
audit.ERROR.category!
audit script error
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
cell line
GM12878
18
HepG2
5
tissue
spleen
7
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