Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
35
transcription factor
21
histone
21
histone modification
13
narrow histone mark
8
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
September, 2018
10
November, 2017
4
October, 2017
3
November, 2018
December, 2017
Available data
56
fastq
55
bam
54
bigWig
16
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
56
Homo sapiens
Biosample type
26
tissue
13
cell line
12
primary cell
5
in vitro differentiated cells
Organ
22
pancreas
17
connective tissue
13
liver
12
adipose tissue
4
brain
Project
56
AMP
Genome assembly (visualization)
54
hg19
47
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
56
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
assay_title!
single cell RNA-seq
month_released!
December, 2017
September, 2018
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
13
primary cell
pancreatic endocrine cell
12
in vitro differentiated cells
adipocyte
5
Download