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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
Assay category
35
DNA methylation
Date released
23
July, 2019
6
August, 2017
6
November, 2018
Available data
2224
bam
2070
bigWig
1401
bed narrowPeak
794
tsv
761
fastq
684
bigBed narrowPeak
376
tagAlign
269
bed bed3+
261
bed broadPeak
225
bigBed broadPeak
101
zippedFastqFolder
64
xls
63
txt
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
10
bed bed3
4
hdf5
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
35
Homo sapiens
Biosample type
25
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
single cell RNA-seq
audit.WARNING.category!
inconsistent assembly
biosample_type!
cell line
month_released!
February, 2021
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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