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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2776
bam
2548
bigWig
1521
bed narrowPeak
1219
tsv
942
fastq
932
bigBed narrowPeak
297
tagAlign
272
bed broadPeak
236
bigBed broadPeak
235
bed bed3+
148
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
cell line
primary cell
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
single cell RNA-seq
audit.WARNING.category!
inconsistent assembly
biosample_type!
primary cell
files.file_type!
vcf
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
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