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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
total RNA-seq
2
pCHi-C
single cell RNA-seq
Assay category
105
Transcription
Date released
79
May, 2021
February, 2021
15
February, 2018
7
August, 2021
4
March, 2020
2
October, 2019
Available data
269
bam
237
bigWig
141
fastq
132
bed narrowPeak
107
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bedpe bed3+
5
bed bed3
4
hic
3
bed bedgraph
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
107
Homo sapiens
Biosample type
520
tissue
163
primary cell
107
in vitro differentiated cells
41
cell line
4
stem cell
Organ
6
embryo
2
epithelium
1
connective tissue
1
heart
Project
107
AMP
Genome assembly (visualization)
105
GRCh38
105
hg19
Lab
107
AMP-T2D consortium
Audit category:
70
inconsistent ontology term
assay_title!
single cell RNA-seq
audit.WARNING.category!
inconsistent assembly
month_released!
February, 2021
BIOSAMPLE
ASSAY
107 results
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total RNA-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
neural progenitor cell
7
cardiomyocytes (cardiac muscle cell)
3
1
pancreatic endoderm
4
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