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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
41
WGBS
single cell RNA-seq
26
total RNA-seq
21
snATAC-seq
Assay category
98
DNA accessibility
41
DNA methylation
26
Transcription
Date released
February, 2021
406
November, 2017
397
May, 2021
375
August, 2017
341
May, 2020
306
October, 2019
208
August, 2021
200
February, 2023
165
May, 2022
120
July, 2018
120
May, 2019
101
July, 2019
80
April, 2019
79
December, 2017
78
November, 2018
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
15
November, 2020
12
May, 2023
10
April, 2020
9
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
101
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
7
txt
bed bed3+
Organism
165
Homo sapiens
Biosample type
101
primary cell
64
tissue
Organ
104
pancreas
80
epithelium
40
liver
Project
101
HPAP
64
AMP
Genome assembly (visualization)
38
hg19
Lab
101
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
assay_title!
single cell RNA-seq
audit.WARNING.category!
inconsistent assembly
files.file_type!
bed bed3+
month_released!
February, 2021
BIOSAMPLE
ASSAY
165 results
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Clear Filters
ATAC-seq
WGBS
total RNA-seq
snATAC-seq
primary cell
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
Langerhans cell
21
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
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