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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
12
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
692
February, 2021
364
August, 2017
307
October, 2019
296
May, 2020
230
May, 2021
214
June, 2019
202
August, 2021
181
February, 2023
166
May, 2022
162
November, 2017
120
July, 2018
115
May, 2019
105
July, 2019
74
April, 2019
72
September, 2018
61
October, 2018
60
November, 2019
57
March, 2020
52
December, 2017
39
February, 2018
35
May, 2024
25
February, 2020
23
November, 2018
23
October, 2017
19
September, 2020
16
January, 2019
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2018
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
August, 2018
1
August, 2022
Available data
58
bam
36
bed narrowPeak
30
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
40
tissue
15
cell line
5
in vitro differentiated cells
Organ
54
pancreas
15
epithelium
1
adipose tissue
1
connective tissue
Project
60
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
single cell RNA-seq
award.project!
T1D
month_released!
August, 2018
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
12
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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