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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
16
total RNA-seq
3
Hi-C
Assay category
97
DNA accessibility
47
DNA methylation
16
Transcription
3
3D chromatin structure
Date released
101
May, 2022
February, 2023
33
February, 2021
19
September, 2020
7
August, 2020
3
October, 2022
Available data
101
zippedFastqFolder
59
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
163
Homo sapiens
Biosample type
163
primary cell
Organ
115
epithelium
115
pancreas
Project
3959
AMP
T1D
163
HPAP
10
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
163
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
single cell RNA-seq
award.project!
T1D
month_released!
February, 2023
BIOSAMPLE
ASSAY
163 results
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Clear Filters
ATAC-seq
snATAC-seq
WGBS
total RNA-seq
Hi-C
primary cell
pancreatic alpha cell
29
31
15
1
Langerhans cell
48
pancreatic beta cell
16
16
1
1
pancreatic acinar cell
4
1
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