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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
41
WGBS
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
7
ChIP-seq
Assay category
99
DNA accessibility
41
DNA methylation
26
Transcription
7
DNA binding
Target of assay
4
control
3
transcription factor
Date released
601
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
218
June, 2019
198
February, 2023
169
August, 2021
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
72
September, 2018
53
March, 2020
45
November, 2019
40
May, 2024
39
February, 2018
26
November, 2018
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
12
May, 2023
11
September, 2017
10
April, 2020
10
November, 2020
7
August, 2020
7
December, 2018
7
December, 2019
7
January, 2018
7
January, 2019
5
March, 2019
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
Available data
101
zippedFastqFolder
41
bed narrowPeak
31
bam
31
fastq
23
bigWig
7
txt
3
bigBed narrowPeak
1
bed bed3+
Organism
173
Homo sapiens
Biosample type
101
primary cell
72
tissue
cell line
Organ
104
pancreas
80
epithelium
40
liver
7
spleen
1
musculature of body
Project
101
HPAP
72
AMP
Genome assembly (visualization)
42
hg19
3
GRCh38
Lab
101
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
single cell RNA-seq
biosample_type!
cell line
month_released!
June, 2018
BIOSAMPLE
ASSAY
173 results
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Clear Filters
ATAC-seq
WGBS
total RNA-seq
snATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
Langerhans cell
21
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
spleen
7
skeletal muscle tissue
1
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