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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
304
control
139
histone
139
histone modification
72
narrow histone mark
67
broad histone mark
45
transcription factor
9
RNA binding protein
5
nucleotide modification
1
recombinant protein
Date released
28
August, 2017
23
October, 2019
10
May, 2021
9
November, 2017
1
December, 2017
1
October, 2017
Available data
321
bigWig
bed narrowPeak
300
bam
122
tagAlign
121
bigBed narrowPeak
70
fastq
16
bed broadPeak
11
bed bed3+
6
bigBed broadPeak
1
tagAlign bed3+
Organism
72
Homo sapiens
Biosample type
56
tissue
15
in vitro differentiated cells
primary cell
1
cell line
Organ
15
connective tissue
11
brain
10
adipose tissue
9
liver
6
pancreas
4
gonad
4
ovary
2
eye
musculature of body
1
embryo
1
limb
1
lymph node
Project
72
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
62
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
1
inconsistent control read length
assay_title!
single cell RNA-seq
biosample_type!
primary cell
files.file_type!
bed narrowPeak
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
27
subcutaneous abdominal adipose tissue
10
liver
8
cingulate gyrus
3
substantia nigra
2
+ See 6 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
4
pancreatic endoderm
1
cell line
HepG2
1
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